G-matrix Fourier transform NMR spectroscopy for complete protein resonance assignment
Author(s) -
Hanudatta S. Atreya,
Thomas Szyperski
Publication year - 2004
Publication title -
proceedings of the national academy of sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.011
H-Index - 771
eISSN - 1091-6490
pISSN - 0027-8424
DOI - 10.1073/pnas.0403529101
Subject(s) - nuclear magnetic resonance spectroscopy , fourier transform , structural genomics , spectroscopy , nuclear magnetic resonance , chemistry , two dimensional nuclear magnetic resonance spectroscopy , resonance (particle physics) , transverse relaxation optimized spectroscopy , amide , relaxation (psychology) , analytical chemistry (journal) , protein structure , fluorine 19 nmr , physics , biology , biochemistry , atomic physics , chromatography , quantum mechanics , neuroscience
A G-matrix Fourier transform (GFT) NMR spectroscopy-based strategy for resonance assignment of proteins is described. Each of the GFT NMR experiments presented here rapidly affords four-, five-, or six-dimensional spectral information in combination with precise measurements of chemical shifts. The resulting high information content enables one to obtain nearly complete assignments by using only four NMR experiments. For the backbone amide proton detected "out-and-back" experiments, data collection was further accelerated up to approximately 2.5-fold by use of longitudinal (1)H relaxation optimization. The GFT NMR experiments were acquired for three proteins with molecular masses ranging from 8.6 to 17 kDa, demonstrating that the proposed strategy is of key interest for automated resonance assignment in structural genomics.
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