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Impacts of prior mis-specification on Bayesian fisheries stock assessment
Author(s) -
Yong Chen,
ChiLu Sun,
Minoru Kanaiwa
Publication year - 2008
Publication title -
marine and freshwater research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.693
H-Index - 88
eISSN - 1448-6059
pISSN - 1323-1650
DOI - 10.1071/mf07126
Subject(s) - prior probability , stock assessment , bayesian probability , econometrics , cauchy distribution , stock (firearms) , posterior predictive distribution , computer science , bayesian inference , fishery , bayesian linear regression , statistics , mathematics , artificial intelligence , fishing , biology , geography , archaeology
One of the key features of a Bayesian stock assessment is that the modeller needs to provide knowledge on model parameters. Priors summarise modellers' understanding of model parameters and are often defined by a probability distribution function. Priors are often mis-specified with arbitrary and unrealistic accuracy and precision in perceiving the state of nature for the parameters as a result of our limited understanding of fisheries ecosystems. Commonly used probability functions such as normal distribution functions tend to be sensitive to prior mis-specification, resulting in large uncertainty and/or errors in Bayesian stock assessment. Fat-tailed functions such as the Cauchy distribution function have been found to be robust to prior mis-specification. Using the Maine sea urchin fishery as an example, we evaluated the impacts of mis-specification in defining the prior distributions on Bayesian stock assessment. The present study suggests that the quantification of priors with a Cauchy distribution tends to be robust to the prior mis-specification. Given our limited understanding of fisheries a function such as the Cauchy distribution function that is robust to prior mis-specification tends to be more desirable. Future studies should explore the use of other fat-tailed distribution functions for quantifying priors in fisheries stock assessment.

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