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Fractional diffusion on the human proteome as an alternative to the multi-organ damage of SARS-CoV-2
Author(s) -
Ernesto Estrada
Publication year - 2020
Publication title -
chaos an interdisciplinary journal of nonlinear science
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.971
H-Index - 113
eISSN - 1089-7682
pISSN - 1054-1500
DOI - 10.1063/5.0015626
Subject(s) - covid-19 , proteome , computational biology , sars virus , diffusion , biology , virology , medicine , bioinformatics , physics , pathology , outbreak , infectious disease (medical specialty) , disease , thermodynamics
The coronavirus 2019 (COVID-19) respiratory disease is caused by the novel coronavirus SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2), which uses the enzyme ACE2 to enter human cells. This disease is characterized by important damage at a multi-organ level, partially due to the abundant expression of ACE2 in practically all human tissues. However, not every organ in which ACE2 is abundant is affected by SARS-CoV-2, which suggests the existence of other multi-organ routes for transmitting the perturbations produced by the virus. We consider here diffusive processes through the protein–protein interaction (PPI) network of proteins targeted by SARS-CoV-2 as an alternative route. We found a subdiffusive regime that allows the propagation of virus perturbations through the PPI network at a significant rate. By following the main subdiffusive routes across the PPI network, we identify proteins mainly expressed in the heart, cerebral cortex, thymus, testis, lymph node, kidney, among others of the organs reported to be affected by COVID-19.

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