Pathogenic Escherichia coli strain discrimination using laser-induced breakdown spectroscopy
Author(s) -
Jonathan D. Diedrich,
Steven J. Rehse,
Sunil Palchaudhuri
Publication year - 2007
Publication title -
journal of applied physics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.699
H-Index - 319
eISSN - 1089-7550
pISSN - 0021-8979
DOI - 10.1063/1.2752784
Subject(s) - strain (injury) , escherichia coli , bacteria , microbiology and biotechnology , agar , biology , enterobacteriaceae , laser induced breakdown spectroscopy , agar plate , pathogenic bacteria , spectroscopy , chemistry , genetics , physics , gene , anatomy , quantum mechanics
A pathogenic strain of bacteria, Escherichia coli O157:H7 (enterohemorrhagic E. coli or EHEC), has been analyzed by laser-induced breakdown spectroscopy (LIBS) with nanosecond pulses and compared to three nonpathogenic E. coli strains: a laboratory strain of K-12 (AB), a derivative of the same strain termed HF4714, and an environmental strain, E. coli C (Nino C). A discriminant function analysis (DFA) was performed on the LIBS spectra obtained from live colonies of all four strains. Utilizing the emission intensity of 19 atomic and ionic transitions from trace inorganic elements, the DFA revealed significant differences between EHEC and the Nino C strain, suggesting the possibility of identifying and discriminating the pathogenic strain from commonly occurring environmental strains. EHEC strongly resembled the two K-12 strains, in particular, HF4714, making discrimination between these strains difficult. DFA was also used to analyze spectra from two of the nonpathogenic strains cultured in different media...
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