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The van der Waals interaction between protein molecules in an electrolyte solution
Author(s) -
Xueyu Song,
Xuefeng Zhao
Publication year - 2004
Publication title -
the journal of chemical physics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.071
H-Index - 357
eISSN - 1089-7690
pISSN - 0021-9606
DOI - 10.1063/1.1634955
Subject(s) - van der waals force , electrolyte , molecule , chemistry , dielectric , poisson–boltzmann equation , dlvo theory , anisotropy , physics , thermodynamics , computational chemistry , chemical physics , ion , quantum mechanics , colloid , organic chemistry , electrode
In this report we present a general formulation to calculate the van der Waals interaction between two protein molecules in an electrolyte solution using boundary element method of solving linearized Poisson-Boltzmann equation. Our formulation is based upon an inhomogeneous dielectric model of proteins at the residue level. Our results for bovine pancreatic trypsin inhibitor at various relative orientations indicate that the anisotropy of the interaction can be tens of kBT.

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