Open AccessThe use of molecular markers to investigate the genetic structure of an oil palm breeding programme
Author(s) -
Sean Mayes,
Peter Jack,
R. H. V. Corley
Publication year - 2000
Publication title -
heredity
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.441
H-Index - 118
eISSN - 1365-2540
pISSN - 0018-067X
DOI - 10.1046/j.1365-2540.2000.00758.x
Subject(s) - biology , germplasm , palm , tenera , genetic diversity , breeding program , selection (genetic algorithm) , elaeis guineensis , restriction fragment length polymorphism , microsatellite , palm oil , microbiology and biotechnology , agronomy , genetics , cultivar , agroforestry , gene , allele , genotype , population , physics , demography , quantum mechanics , artificial intelligence , sociology , computer science
RFLP markers (40 probes covering 60% of the oil palm genome) have been used to assess genetic diversity within 54 palms of a specific oil palm breeding programme. A further 10 palms encompassing a broader range of origins were also included to provide a wider framework for comparative analysis. These palms represent a majority of the parents in a crossing programme which aims to combine the best features of African tenera germplasm with South‐east Asian Deli dura material. Progeny from these crosses are planted in up to six sites on three continents, where the palms are being assessed in detail for yield components. A total of 157 RFLP bands were scored and the data analysed by calculating genetic distances according to Nei & Li, and by correspondence and cluster analysis. The relationships that emerge through this molecular analysis correspond well with known pedigree and provenance. For example, south‐east Asian Deli dura material forms a cluster clearly distinct from AVROS pisifera gene pools, and a selection of African breeding material forms a further and broader grouping. The potential ability of markers to assist in oil palm breeding through examination of the genetic structure of crossing programmes is discussed, as is their value in parental selection to maintain residual diversity within specific breeding pools and use in evaluating the fidelity of breeding lineages.