Unraveling the molecular conformations of a single ruthenium complex adsorbed on the Ag(111) surface by calculations
Author(s) -
Youness Benjalal,
Jacques Bonvoisin,
Xavier Bouju
Publication year - 2019
Publication title -
physical chemistry chemical physics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.053
H-Index - 239
eISSN - 1463-9084
pISSN - 1463-9076
DOI - 10.1039/c9cp01244c
Subject(s) - ruthenium , molecule , scanning tunneling microscope , adsorption , substrate (aquarium) , materials science , crystallography , chemical physics , enantiomer , chemistry , computational chemistry , stereochemistry , nanotechnology , organic chemistry , catalysis , oceanography , geology
The tris(dibenzoylmethanato)ruthenium (Ru(dbm)3) molecule has recently been characterized by scanning tunneling microscopy (STM) experiments upon adsorption on Ag(111). The adsorbed Ru(dbm)3 molecule shows two conformations with respect to the [11[combining macron]0] direction of the substrate, one with a three-lobed feature and the other one with a bi-lobed structure. For each of these structures, the molecule can take two geometries (states). Molecular mechanics calculations in a semi-empirical framework and STM calculated images reveal that these states on the substrate originate from the enantiomer of the Ru(dbm)3 molecule in the case of three-lobed structure and from the rotation of the two phenyls in the top dbm moities for the bi-lobed form.
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