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Hydration profiles of aromatic amino acids: conformations and vibrations ofl-phenylalanine–(H2O)nclusters
Author(s) -
Takayuki Ebata,
Takayo Hashimoto,
Takafumi Ito,
Yoshiya Inokuchi,
Fuat Altunsu,
Bernhard Brutschy,
P. Tarakeshwar
Publication year - 2006
Publication title -
physical chemistry chemical physics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.053
H-Index - 239
eISSN - 1463-9084
pISSN - 1463-9076
DOI - 10.1039/b609229b
Subject(s) - chemistry , conformational isomerism , hydrogen bond , molecule , ab initio , phenylalanine , crystallography , ab initio quantum chemistry methods , stereochemistry , hydrogen , resonance (particle physics) , amino acid , computational chemistry , organic chemistry , biochemistry , physics , particle physics
IR-UV double resonance spectroscopy and ab initio calculations were employed to investigate the structures and vibrations of the aromatic amino acid, L-phenylalanine-(H(2)O)(n) clusters formed in a supersonic free jet. Our results indicate that up to three water molecules are preferentially bound to both the carbonyl oxygen and the carboxyl hydrogen of L-phenylalanine (L-Phe) in a bridged hydrogen-bonded conformation. As the number of water molecules is increased, the bridge becomes longer. Two isomers are found for L-Phe-(H(2)O)(1), and both of them form a cyclic hydrogen-bond between the carboxyl group and the water molecule. In L-Phe-(H(2)O)(2), only one isomer was identified, in which two water molecules form extended cyclic hydrogen bonds with the carboxyl group. In the calculated structure of L-Phe-(H(2)O)(3) the bridge of water molecules becomes larger and exhibits an extended hydrogen-bond to the pi-system. Finally, in isolated L-Phe, the D conformer was found to be the most stable conformer by the experiment and by the ab initio calculation.

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