Open Access2011 German Escherichia coli outbreak: Prophage analysis of close-assembled TY2482 against 55989 using PHAST
Author(s) -
Man Kit Cheung,
Lei Li,
Wenyan g,
Hoi Shan Kwan
Publication year - 2011
Publication title -
nature precedings
Language(s) - English
Resource type - Journals
ISSN - 1756-0357
DOI - 10.1038/npre.2011.6110.1
Subject(s) - prophage , german , outbreak , escherichia coli , biology , microbiology and biotechnology , computational biology , virology , genetics , geography , gene , bacteriophage , archaeology
Using the Hiseq data of the German E. coli outbreak isolate TY2482, preliminary prophage analyses have been performed by some researchers previously. With the closed assembly of the same isolate being available, another round of analysis might help in resolving questions that remain unclear due to the incompleteness of the dataset
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