In silico Gene Characterization and biological annotation of Aspergillus niger CBS 513.88
Author(s) -
Anuraj Nayarisseri,
Mukesh Yadav,
Vini Lokhande,
Rajesh Patidar,
Mayura Maynal
Publication year - 2011
Publication title -
nature precedings
Language(s) - English
Resource type - Journals
ISSN - 1756-0357
DOI - 10.1038/npre.2011.5806.1
Subject(s) - annotation , genome , gene annotation , genome project , aspergillus niger , computational biology , gene prediction , in silico , gene , reference genome , biology , computer science , genetics , microbiology and biotechnology
Genome annotation is the process of estimation of biological features from genomic data. The target of a genome annotation is to identify the key features of the genome sequence particularly, the genes and gene products. The characteristics of a gene, its products, and gene prediction programs of Aspergillus niger are discussed. Although the number of genomes in genomic databases are increasing day by day, genome-wide analyses are affected by the quality of the genome annotations. This study illustrates the importance of integrative approaches for automatic annotations of genomes of Aspergillus niger by computational methods. However, the annotation process is more complicated in Eukaryotes; we used a comparative study for gene prediction using the FgenesH algorithm by various software providers. The final annotation of Aspergillus niger CBS 513.88. has been created as a GB file in Artemis, A sequence viewer and annotation tool was developed in the anger Institute
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