Crux: Rapid Open Source Protein Tandem Mass Spectrometry Analysis | Zendy

Sean McIlwain | Zendy; Kaipo Tamura | Zendy; Attila KertészFarkas | Zendy; Charles E. Grant | Zendy; Benjamin J. Diament | Zendy; Barbara Frewen | Zendy; James Jeffry Howbert | Zendy; Michael R. Hoopmann | Zendy; Lukas Käll | Zendy; Jimmy K. Eng | Zendy; Michael J. MacCoss | Zendy; William Stafford Noble | Zendy

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Crux: Rapid Open Source Protein Tandem Mass Spectrometry Analysis

Author(s) -

Sean McIlwain,

Kaipo Tamura,

Attila KertészFarkas,

Charles E. Grant,

Benjamin J. Diament,

Barbara Frewen,

James Jeffry Howbert,

Michael R. Hoopmann,

Lukas Käll,

Jimmy K. Eng,

Michael J. MacCoss,

William Stafford Noble

Publication year - 2014

Publication title -

journal of proteome research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.644

H-Index - 161

eISSN - 1535-3907

pISSN - 1535-3893

DOI - 10.1021/pr500741y

Subject(s) - suite , computer science , open source , mass spectrometry , tandem mass spectrometry , software , software suite , tandem mass tag , open source software , chemistry , proteomics , chromatography , quantitative proteomics , programming language , biochemistry , archaeology , gene , history

Efficiently and accurately analyzing big protein tandem mass spectrometry data sets requires robust software that incorporates state-of-the-art computational, machine learning, and statistical methods. The Crux mass spectrometry analysis software toolkit ( http://cruxtoolkit.sourceforge.net ) is an open source project that aims to provide users with a cross-platform suite of analysis tools for interpreting protein mass spectrometry data.

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