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How Experimental Errors Influence Drug Metabolism and Pharmacokinetic QSAR/QSPR Models
Author(s) -
Mark C. Wenlock,
Lars Carlsson
Publication year - 2014
Publication title -
journal of chemical information and modeling
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.24
H-Index - 160
eISSN - 1549-960X
pISSN - 1549-9596
DOI - 10.1021/ci500535s
Subject(s) - quantitative structure–activity relationship , training set , test set , experimental data , computer science , data set , ranging , set (abstract data type) , machine learning , mathematics , artificial intelligence , statistics , telecommunications , programming language
We consider the impact of gross, systematic, and random experimental errors in relation to their impact on the predictive ability of QSAR/QSPR DMPK models used within early drug discovery. Models whose training sets contain fewer but repeatedly measured data points, with a defined threshold for the random error, resulted in prediction improvements ranging from 3.3% to 23.0% for an external test set, compared to models built from training sets in which the molecules were defined by single measurements. Similarly, models built on data with low experimental uncertainty, compared to those built on data with higher experimental uncertainty, gave prediction improvements ranging from 3.3% to 27.5%.

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