z-logo
open-access-imgOpen Access
Integration of Cryo-EM Model Building Software in Scipion
Author(s) -
Marta Martínez,
Amaya Jiménez-Moreno,
David Maluenda,
Erney Ramírez-Aportela,
Roberto Melero,
Ana Cuervo,
Pablo Conesa,
Laura del Caño,
Yunior C. Fonseca,
Rubén Sánchez-García,
David Střelák,
José Javier Conesa,
E. Fernández-Giménez,
F. de Isidro,
Carlos Óscar S. Sorzano,
J.M. Carazo,
R. Marabini
Publication year - 2020
Publication title -
journal of chemical information and modeling
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.24
H-Index - 160
eISSN - 1549-960X
pISSN - 1549-9596
DOI - 10.1021/acs.jcim.9b01032
Subject(s) - workflow , cryo electron microscopy , computer science , software , resolution (logic) , image processing , extension (predicate logic) , data mining , image (mathematics) , software engineering , artificial intelligence , database , chemistry , programming language , biochemistry
Advances in cryo-electron microscopy (cryo-EM) have made it possible to obtain structures of large biological macromolecules at near-atomic resolution. This "resolution revolution" has encouraged the use and development of modeling tools able to produce high-quality atomic models from cryo-EM density maps. Unfortunately, many practical problems appear when combining different packages in the same processing workflow, which make difficult the use of these tools by non-experts and, therefore, reduce their utility. We present here a major extension of the image processing framework Scipion hat provides inter-package integration in the model building area and full tracking of the complete workflow, from image processing to structure validation.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom