Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information | Zendy

Ying Chen | Zendy; Kunie Sakurai | Zendy; Sumihiro Maeda | Zendy; Tohru Masui | Zendy; Hideyuki Okano | Zendy; Johannes Dewender | Zendy; Stefanie Seltmann | Zendy; Armin Kurtz | Zendy; Hiroshi Masuya | Zendy; Yukio Nakamura | Zendy; Michael Sheldon | Zendy; Juliane Schneider | Zendy; Glyn Stacey | Zendy; Yulia Panina | Zendy; Wataru Fujibuchi | Zendy

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Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information

Author(s) -

Ying Chen,

Kunie Sakurai,

Sumihiro Maeda,

Tohru Masui,

Hideyuki Okano,

Johannes Dewender,

Stefanie Seltmann,

Armin Kurtz,

Hiroshi Masuya,

Yukio Nakamura,

Michael Sheldon,

Juliane Schneider,

Glyn Stacey,

Yulia Panina,

Wataru Fujibuchi

Publication year - 2021

Publication title -

stem cell reports

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.207

H-Index - 76

ISSN - 2213-6711

DOI - 10.1016/j.stemcr.2021.02.014

Subject(s) - stem cell , biology , online database , computer science , database , information retrieval , microbiology and biotechnology

The past decade has witnessed an extremely rapid increase in the number of newly established stem cell lines. However, due to the lack of a standardized format, data exchange among stem cell line resources has been challenging, and no system can search all stem cell lines across resources worldwide. To solve this problem, we have developed the Integrated Collection of Stem Cell Bank data (ICSCB) (http://icscb.stemcellinformatics.org/), the largest database search portal for stem cell line information, based on the standardized data items and terms of the MIACARM framework. Currently, ICSCB can retrieve >16,000 cell lines from four major data resources in Europe, Japan, and the United States. ICSCB is automatically updated to provide the latest cell line information, and its integrative search helps users collect cell line information for over 1,000 diseases, including many rare diseases worldwide, which has been a formidable task, thereby distinguishing itself from other database search portals.

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