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Comparative Gene Expression Analysis of Mouse and Human Cardiac Maturation
Author(s) -
Hideki Uosaki,
Yh. Taguchi
Publication year - 2016
Publication title -
genomics proteomics and bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.114
H-Index - 49
eISSN - 2210-3244
pISSN - 1672-0229
DOI - 10.1016/j.gpb.2016.04.004
Subject(s) - biology , gene expression , gene , microarray analysis techniques , microarray , gene expression profiling , fetus , regeneration (biology) , heart development , transcriptome , computational biology , genetics , microbiology and biotechnology , embryonic stem cell , pregnancy
Understanding how human cardiomyocytes mature is crucial to realizing stem cell-based heart regeneration, modeling adult heart diseases, and facilitating drug discovery. However, it is not feasible to analyze human samples for maturation due to inaccessibility to samples while cardiomyocytes mature during fetal development and childhood, as well as difficulty in avoiding variations among individuals. Using model animals such as mice can be a useful strategy; nonetheless, it is not well-understood whether and to what degree gene expression profiles during maturation are shared between humans and mice. Therefore, we performed a comparative gene expression analysis of mice and human samples. First, we examined two distinct mice microarray platforms for shared gene expression profiles, aiming to increase reliability of the analysis. We identified a set of genes displaying progressive changes during maturation based on principal component analysis. Second, we demonstrated that the genes identified had a differential expression pattern between adult and earlier stages (e.g., fetus) common in mice and humans. Our findings provide a foundation for further genetic studies of cardiomyocyte maturation.

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