A 2-D guinea pig lung proteome map | Zendy

Simone Schüller | Zendy; Kjell Sergeant | Zendy; Jenny Renaut | Zendy; John J. Callanan | Zendy; Caitríona Scaife | Zendy; Jarlath E. Nally | Zendy

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A 2-D guinea pig lung proteome map

Author(s) -

Simone Schüller,

Kjell Sergeant,

Jenny Renaut,

John J. Callanan,

Caitríona Scaife,

Jarlath E. Nally

Publication year - 2015

Publication title -

data in brief

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.122

H-Index - 30

ISSN - 2352-3409

DOI - 10.1016/j.dib.2015.04.009

Subject(s) - proteomics , proteome , computational biology , biology , genome , genomics , transcriptome , bioinformatics , genetics , gene , gene expression

Guinea pigs represent an important model for a number of infectious and non-infectious pulmonary diseases. The guinea pig genome has recently been sequenced to full coverage, opening up new research avenues using genomics, transcriptomics and proteomics techniques in this species. In order to further annotate the guinea pig genome and to facilitate future pulmonary proteomics in this species we constructed a 2-D guinea pig proteome map including 486 protein identifications and post translational modifications (PTMs). The map has been up-loaded to the UCD 2D-PAGE open access database (http://proteomics-portal.ucd.ie/). Transit peptides, N-terminal acetylations and other PTMs are available via Peptideatlas (ftp://PASS00619:NM455hi@ftp.peptideatlas.org/). This dataset is associated with a research article published in the Journal of Proteomics [1].

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