Dynamic Transcriptome-Proteome Correlation Networks Reveal Human Myeloid Differentiation and Neutrophil-Specific Programming
Author(s) -
Arie J. Hoogendijk,
Farzin Pourfarzad,
Cathelijn E.M. Aarts,
Anton T. J. Tool,
Ida H. Hiemstra,
Luigi Grassi,
Mattia Frontini,
Alexander B. Meijer,
Maartje van den Biggelaar,
Taco W. Kuijpers
Publication year - 2019
Publication title -
cell reports
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 6.264
H-Index - 154
eISSN - 2639-1856
pISSN - 2211-1247
DOI - 10.1016/j.celrep.2019.10.082
Subject(s) - transcriptome , proteome , biology , progenitor cell , proteomics , innate immune system , myeloid cells , myeloid , bone marrow , microbiology and biotechnology , immunology , stem cell , immune system , bioinformatics , gene expression , genetics , gene
Human neutrophilic granulocytes form the largest pool of innate immune cells for host defense against bacterial and fungal pathogens. The dynamic changes that accompany the metamorphosis from a proliferating myeloid progenitor cell in the bone marrow into a mature non-dividing polymorphonuclear blood cell have remained poorly defined. Using mass spectrometry-based quantitative proteomics combined with transcriptomic data, we report on the dynamic changes of five developmental stages in the bone marrow and blood. Integration of transcriptomes and proteome unveils highly dynamic and differential interactions between RNA and protein kinetics during human neutrophil development, which can be linked to functional maturation of typical end-stage blood neutrophil killing activities.
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