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Additive Biclustering: A Comparison of One New and Two Existing ALS Algorithms
Author(s) -
Tom F. Wilderjans,
Dirk Depril,
Iven Van Mechelen
Publication year - 2013
Publication title -
journal of classification
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.657
H-Index - 40
eISSN - 1432-1343
pISSN - 0176-4268
DOI - 10.1007/s00357-013-9120-0
Subject(s) - biclustering , algorithm , computer science , variable (mathematics) , object (grammar) , function (biology) , cluster analysis , mathematics , data mining , artificial intelligence , cure data clustering algorithm , mathematical analysis , correlation clustering , evolutionary biology , biology
The additive biclustering model for two-way two-mode object by variable data implies overlapping clusterings of both the objects and the variables together with a weight for each bicluster (i.e., a pair of an object and a variable cluster). In the data analysis, an additive biclustering model is fitted to given data by means of minimizing a least squares loss function. To this end, two alternating least squares algorithms (ALS) may be used: (1) PENCLUS, and (2) Baier's ALS approach. However, both algorithms suffer from some inherent limitations, which may hamper their performance. As a way out, based on theoretical results regarding optimally designing ALS algorithms, in this paper a new ALS algorithm will be presented. In a simulation study this algorithm will be shown to outperform the existing ALS approaches.status: publishe

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