Genetic Relatedness among Lansium domesticum Accessions Using RAPD Markers
Author(s) -
Binbin Song
Publication year - 2000
Publication title -
annals of botany
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.567
H-Index - 176
eISSN - 1095-8290
pISSN - 0305-7364
DOI - 10.1006/anbo.2000.1186
Subject(s) - biology , rapd , dendrogram , upgma , botany , jaccard index , genetic distance , genetic relationship , genetic diversity , genetic variation , genetics , gene , population , demography , sociology , artificial intelligence , pattern recognition (psychology) , computer science
Genetic relatedness among 85 Lansium domesticum Corr. accessions from Peninsular Malaysia were investigated using random amplified polymorphic DNA (RAPD) markers. Ten primers were used for amplification and yielded a total of 113 bands, of which 107 were polymorphic. Homology tests showed that the RAPD bands used in the study satisfy assumptions of homology and non-allelic behaviour. A dendrogram showing genetic similarities among accessions was constructed based on the 107 polymorphic bands using UPGMA cluster analysis. Jaccard similarity coefficients ranged from 0.25 to 1.00 among accessions indicating a diverse genepool in the species indicative of different species parentage. The dendrogram separated the 85 accessions into three main clusters, one comprising 56 accessions which possess thin-skinned fruit (mostly Dokong and Langsat), while the second has 28 accessions (mostly Duku-langsat, Duku Terengganu and Duku Johor) with thick fruit skin and the third comprising only one accession, namely Duku hutan. Thus, RAPD analysis was a useful tool for determining the genetic relatedness among accessions and identifying different types of L. domesticum .
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom