Scaffold Searching: Automated Identification of Similar Ring Systems for the Design of Combinatorial Libraries
Author(s) -
Bohl Martin,
Dunbar James,
Gifford Eric M.,
Heritage Trevor,
Wild David J.,
Willett Peter,
Wilton David J.
Publication year - 2002
Publication title -
quantitative structure‐activity relationships
Language(s) - English
Resource type - Journals
eISSN - 1521-3838
pISSN - 0931-8771
DOI - 10.1002/qsar.200290001
Subject(s) - ring (chemistry) , scaffold , identification (biology) , computer science , similarity (geometry) , position (finance) , combinatorial method , mathematics , artificial intelligence , chemistry , combinatorics , biology , programming language , botany , organic chemistry , finance , economics , image (mathematics)
Rigid ring systems can be used to position receptor‐binding functional groups in 3D space and they thus play an increasingly important role in the design of combinatorial libraries. This paper discusses the use of shape‐similarity methods to identify ring systems that are structurally similar to, and aligned with, a user‐defined target ring system. These systems can be used as alternative scaffolds for the construction of a combinatorial library.
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