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Premise of the study:  We developed microsatellite markers for  Carpotroche brasiliensis  (Flacourtiaceae), a dioecious tree that is used as a food resource by midsize animals of the Brazilian fauna.    Methods and Results:  We designed 30 primer pairs using next‐generation sequencing and classified 25 pairs as polymorphic. Observed heterozygosity ranged from 0.5 to 1.0, and expected heterozygosity ranged from 0.418 to 0.907. The combined probability of exclusion was greater than 0.999 and the combined probability of identity was less than 0.001, indicating that these microsatellites are appropriate for investigations of genetic structure, individual identification, and paternity testing.    Conclusions:  The developed molecular tools may contribute to future studies of population genetics, answering ecological and evolutionary questions regarding efficient conservation strategies for  C. brasiliensis .

Microsatellites for Carpotroche brasiliensis (Flacourtiaceae), a useful species for agroforestry and ecosystem conservation