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Behavioural experiments often happen in specialised arenas, but this mayconfound the analysis. To address this issue, we provide tools to study mice inthe homecage environment, equipping biologists with the possibility to capturethe temporal aspect of the individual's behaviour and model the interaction andinterdependence between cage-mates with minimal human intervention. We developthe Activity Labelling Module (ALM) to automatically classify mouse behaviourfrom video, and a novel Group Behaviour Model (GBM) for summarising their jointbehaviour across cages, using a permutation matrix to match the mouseidentities in each cage to the model. We also release two datasets, ABODe fortraining behaviour classifiers and IMADGE for modelling behaviour.

Of Mice and Mates: Automated Classification and Modelling of Mouse Behaviour in Groups using a Single Model across Cages