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COPASI is a popular application for simulation and analysis of biochemicalnetworks and their dynamics. While this software is widely used, it works as astandalone application and until now it was not possible for users to interactwith its models through the web. We built ShinyCOPASI, a web-based applicationthat allows COPASI models to be explored through a web browser. ShinyCOPASI waswritten in R with the CoRC package, which provides a high-level R API forCOPASI, and the Shiny package to expose it as a web application. The web viewprovided by ShinyCOPASI follows a similar interface to the standalone COPASIand allows users to explore the details of a model, as well as running a subsetof the tasks available in COPASI from within a browser. A generic versionallows users to load model files from their computer, while another onepre-loads a specific model from the server and may be useful to provide webaccess to published models. The application is available at:http://shiny.copasi.org/; and the source code is at:https://github.com/copasi/shinyCOPASI.

ShinyCOPASI: a web-based exploratory interface for COPASI models