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Heavy flavor production is an ideal tool to study the properties of the QuarkGluon Plasma (QGP). The heavy flavor production at the Relativistic Heavy IonCollider (RHIC) has its unique kinematic coverage and different productionmechanisms from the Larger Hadron Collider (LHC) measurements. Heavy flavorproducts created in heavy ion collisions experience the whole evolution ofnuclear medium. It's critical to measure both open and closed heavy flavorproducts in different collision systems to isolate cold/hot nuclear mediumeffects and initial/final state interactions. We report recent heavy flavormeasurements at PHENIX in 200 GeV $p$+$p$, $p$+Al, $p$+Au, $^{3}$He+Au andAu+Au collisions that include: the correlated di-muon analysis in 200 GeV$p$+$p$ and $p$+Au collisions; the rapidity and $N_{part}$ dependent $J/\psi$$R_{AB}$ measured in asymmetric small systems; open heavy flavor $v_{2}$measured in 200 GeV d+Au and Au+Au collisions. These measurements providefurther information about the heavy flavor production mechanism, initial andfinal state nuclear modification and flavor dependent energy loss in QGP.

Energy and system size dependent heavy flavor measurements at PHENIX at RHIC