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The increasingly popular light sheet microscopy techniques generate verylarge 3D time-lapse recordings of living biological specimen. The necessity tomake large volumetric datasets available for interactive visualization andanalysis has been widely recognized. However, existing solutions build ondedicated servers to generate virtual slices that are transferred to the clientapplications, practically leading to insufficient frame rates (less than 10frames per second) for truly interactive experience. An easily accessible opensource solution for interactive arbitrary virtual re-slicing of very largevolumes and time series of volumes has yet been missing. We fill this gap withBigDataViewer, a Fiji plugin to interactively navigate and visualize largeimage sequences from both local and remote data sources.

BigDataViewer: Interactive Visualization and Image Processing for Terabyte Data Sets