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The high potential of Bioinformatics research concerning quantitative and qualitative data acquisition such as data warehouses, spatial structure prediction and 3D microscopy conveys the vision of generating a computational virtual cell. This paper discusses an approach which allows the creation and exploration of an abstract compartmented cell environment, which can be used for (semi-)automatic, species- and organelle-specific mapping and the comparison of metabolic data.

CELLMICROCOSMOS 4.1 - An Interactive Approach to Integrating Spatially Localized Metabolic Networks into a Virtual 3D Cell Environment