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It has been proposed that the disagreement tra- ditionally reported between in vitro incubation and in situ estimates of oxygen net community production (NCP) could be explained, at least partially, by undersampling episodic pulses of net autotrophy associated with mesoscale dynam- ics. In this study we compare in vitro incubation estimates of net community production with in situ estimates, de- rived from oxygen profiles and a 1-D model, within a cy- clonic eddy investigated in the Sargasso Sea in summer 2004. The in vitro NCP rates measured at the center of the eddy showed a shift from net autotrophy (7±3 mmol O2 m 2 d 1 ) to net heterotrophy ( 25±5 mmol O2 m 2 d 1 ) from late June to early August. The model-derived NCP rates also showed a temporal decline (19±6 to 3±7 and 11±8 mmol O2 m 2 d 1 ), but they were systematically higher than the in vitro estimates and reported net autotrophy or balance for the sampling period. In this comparison episodic pulses in photosynthesis or respiration driven by mesoscale eddies can not explain the discrepancy between the in vitro and in situ estimates of NCP. This points to methodological artefacts or temporal or submesoscale variability as the mechanisms responsible for the disagreement between the techniques, at least in this dataset.

Net community production of oxygen derived from in vitro and in situ 1-D modeling techniques in a cyclonic mesoscale eddy in the Sargasso Sea