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When estimating genetic variability of groups of local chicken from Nigeria we had to deal with the problemthat the groups could not be regarded as distinct breeds or strains. The original sample groups obviously justrepresent individuals sampled in the same geographical region. The aim was to arrange these chicken in newgroups according to their genetic similarity. Therefore 60 chicken from Nigeria and 10 Dahlem Reds (RIR) weregenotyped at 20 microsatellite loci. In order to build up new groups "allele sharing" was calculated as theproportion of shared alleles between each pair of individuals and was used to construct a dendrogram of allindividuals including Dahlem Reds as a reference group which represents a well defined line. All Dahlem Redsclustered in this dendrogram indicating that this is an adequate approach to group individuals according to theircommon genetic make-up. The Nigerian chicken were arranged in 7 new groups. CHORD genetic distancesbetween these new groups ranged from 0.07 to 0.27 and were higher than the values revealed by the originallocal sample groups (0.05–0.16)

Application of microsatellite analysis to group chicken according to their genetic similarity