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Hemagglutinin  (HA) protein plays an important role in binding the influenza virus to infected  cells and therefore mediates infection. Deposited HA sequences of 86 Asian  strains of influenza A (H1N1) viruses during the first outbreak were obtained  from the NCBI database and compared. Interaction of the HA protein of influenza  A (H1N1) virus with the human sialic acid receptor was also studied using  bioinformatics. Overall, not more than three single-point amino acid  variants/changes were observed in the HA protein region of influenza A (H1N1)  virus from Asian countries when a selected group sequence comparison was made.  The bioinformatics study showed that the HA protein of influenza A (H1N1) binds  to the sialic acid receptor in human airway receptors, possibly key to  air-borne infection in humans.

Hemagglutinin protein of Asian strains of human influenza virus A H1N1 binds to sialic acid - a major component of human airway receptors