High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T)
Author(s) -
Erko Stackebrandt,
Olga Chertkov,
Alla Lapidus,
Matt Nolan,
Susan Lucas,
Cliff Han,
JanFang Cheng,
Roxanne Tapia,
Lynne Goodwin,
David Bruce,
Sam Pitluck,
Konstantinos Liolios,
Konstantinos Mavromatis,
Ioanna Pagani,
Natalia Ivanova,
Natalia Mikhailova,
Marcel Huntemann,
Amrita Pati,
Amy Chen,
Krishna Palaniappan,
Manfred Rohde,
Brian J. Tindall,
Markus Göker,
Tanja Woyke,
John C. Detter,
James Bristow,
Jonathan A. Eisen,
Victor Markowitz,
Philip Hugenholtz,
HansPeter Klenk,
Nikos C. Kyrpides
Publication year - 2013
Publication title -
standards in genomic sciences
Language(s) - English
Resource type - Journals
ISSN - 1944-3277
DOI - 10.4056/sigs.3537045
Subject(s) - biology , genome , replicon , whole genome sequencing , type species , flavobacterium , genetics , flavobacteriaceae , archaea , gene , genus , evolutionary biology , bacteria , zoology , 16s ribosomal rna , bacteroidetes , pseudomonas
At present, Joostella marina Quan et al. 2008 is the sole species with a validly published name in the genus Joostella, family Flavobacteriacae, phylum Bacteriodetes. It is a yellow-pigmented, aerobic, marine organism about which little has been reported other than the chemotaxonomic features required for initial taxonomic description. The genome of J. marina strain En5(T) complements a list of 16 Flavobacteriaceae strains for which complete genomes and draft genomes are currently available. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. This is the first member of the genus Joostella for which a complete genome sequence becomes available. The 4,508,243 bp long single replicon genome with its 3,944 protein-coding and 60 RNA genes is part of the G enomic E ncyclopedia of Bacteria and Archaea project.
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