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Mekong River Basin is one of the world’s fish biodiversity hotspots. Fisheries of the Cambodian Mekong are characterized by high diversity and productivity. However, few studies have focused on broad scale patterns and fish assemblage structure of this important system at a national level. Here, we describe spatial and seasonal variation in fish assemblages by analyzing one year of daily fish catch data sampled at 32 sites covering Cambodia’s main inland water bodies. We recorded 125 fish species. Four clusters were distinguished based on assemblage composition similarity, and 95 indicator species were identified to characterize each of the identified assemblage clusters. High diversity fish assemblages were associated with the upper Mekong system and Mekong/Bassac/Tonle Sap Rivers in Kandal Province and southern Tonle Sap Lake while lower diversity assemblages were observed in the Mekong River in Kratie and the northern area of the Tonle Sap Lake. We find significant variation in the assemblage composition between wet and dry seasons, indicating strong seasonal species turnover within clusters. Length–weight relationship analysis indicated a negative allometric growth among a majority of indicator species, reflecting suboptimal conditions for growth. Our study establishes contemporary structure and diversity patterns in the Lower Mekong River system of Cambodia, which can be used to map fish biodiversity hotspots and assess key indicative fish stocks’ statuses for conservation and management.

water

Cambodian Freshwater Fish Assemblage Structure and Distribution Patterns: Using a Large-Scale Monitoring Network to Understand the Dynamics and Management Implications of Species Clusters in a Global Biodiversity Hotspot