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Biodiversity loss has multiple causes, but habitat degradation through land-use change is the predominant driver. We investigated the effectiveness of the Natura 2000 network in preserving the main wetlands of the two largest islands of the Mediterranean region, whose conservation is critical for many avian species at European and global level, in a 23-year period (1990–2012). In Sardinia, the surroundings of 22 wetlands were affected by an increase in artificial areas (+64 ha/year) and decrease in agricultural (−54 ha/year) and natural (−17 ha/year) ones. In Sicily, the surroundings of 16 wetlands were impacted by an increase in agricultural areas (+50 ha/year) and decrease in natural and semi-natural ones (−62 ha/year). Results show that the Natura 2000 policies were effective in preserving wetlands (no shrinkages detected in both regions), but their surroundings experienced intense processes of degradation and artificialization in all the sub-periods considered (1990–2000, 2000–2006, 2006–2012), whose effects are now threatening waterbirds and wetland integrity. The enlargement of the existing Natura 2000 sites, the creation of new ones and the speedup of the application of the rules of the Habitats and Birds Directives seem necessary to counteract the rapid land-use changes around these important stopover sites.

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Twenty-Three Years of Land-Use Changes Induced Considerable Threats to the Main Wetlands of Sardinia and Sicily (Italy) along the Mediterranean Bird Flyways