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Lentil  (Lens culinaris  Medik.) is a global food crop with increasing importance for food security in south Asia and other regions.  Lens ervoides , a wild relative of cultivated lentil, is an important source of agronomic trait variation.  Lens  is a member of the galegoid clade of the Papilionoideae family, which includes other important dietary legumes such as chickpea ( Cicer arietinum ) and pea ( Pisum sativum ), and the sequenced model legume  Medicago truncatula . Understanding the genetic structure of  Lens  spp. in relation to more fully sequenced legumes would allow leveraging of genomic resources. A set of 1107 TOG-based amplicons were identified in  L. ervoides  and a subset thereof used to design SNP markers for mapping. A map of  L. ervoides  consisting of 377 SNP markers spread across seven linkage groups was developed using a GoldenGate genotyping array and single SNP marker assays. Comparison with maps of  M. truncatula  and  L. culinaris  documented considerable shared synteny and led to the identification of a few major translocations and a major inversion that distinguish  Lens  from  M. truncatula , as well as a translocation that distinguishes  L. culinaris  from  L. ervoides . The identification of chromosome-level differences among Lens spp. will aid in the understanding of introgression of genes from  L. ervoides  into cultivated  L. culinaris , furthering genetic research and breeding applications in lentil.

Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea