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Lysobacter capsici  AZ78 has considerable potential for biocontrol of phytopathogenic microorganisms. However, lack of information about genetic cues regarding its biological characteristics may slow down its exploitation as a biofungicide. In order to obtain a comprehensive overview of genetic features, the  L. capsici  AZ78 genome was sequenced, annotated and compared with the phylogenetically related pathogens  Stenotrophomonas malthophilia  K729a and  Xanthomonas campestris  pv.  campestris  ATCC 33913. Whole genome comparison, supported by functional analysis, indicated that  L. capsici  AZ78 has a larger number of genes responsible for interaction with phytopathogens and environmental stress than  S. malthophilia  K729a and  X. c . pv.  campestris  ATCC 33913. Genes involved in the production of antibiotics, lytic enzymes and siderophores were specific for  L. capsici  AZ78, as well as genes involved in resistance to antibiotics, environmental stressors, fungicides and heavy metals. The  L. capsici  AZ78 genome did not encompass genes involved in infection of humans and plants included in the  S. malthophilia  K729a and  X. c . pv.  campestris  ATCC 33913 genomes, respectively. The  L. capsici  AZ78 genome provides a genetic framework for detailed analysis of other  L. capsici  members and the development of novel biofungicides based on this bacterial strain.

The Lysobacter capsici AZ78 Genome Has a Gene Pool Enabling it to Interact Successfully with Phytopathogenic Microorganisms and Environmental Factors