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For the hydrodynamic modelling component of this project, 2 finite element meshes were developed. The coarser of the 2 meshes used 943 nodes (Fig. S1). This included all main features and included increased resolution for particular areas such as river outflows and 1 island in the upper section of the loch. The second mesh that was developed used 2958 nodes (Fig. S2). This was more detailed, allowing enhanced resolution of certain areas of the loch, including several small islands that were unresolved in the coarser mesh. However, the increased resolution means greatly increased computational cost, resulting in longer run times.

Connectivity modelling and network analysis of sea lice infection in Loch Fyne, west coast of Scotland