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This study investigated the possible phenotypic and genotypic similarities and differences between Salmonella isolates obtained from swine with clinical salmonellosis to isolates obtained from swine showing no clinical disease. Phenotypic analysis was done by antimicrobial resistance profiling and amplified fragment length polymorphism (AFLP) fingerprinting was employed for genotypic analysis. A total of 281 (140 clinical and 141 non-clinical) were included in this study. There was no association between the origin of isolates (clinical or non-clinical) and the antimicrobial resistance profiles with OR of 0.77 and 95%CI (0.46-1.27). However, there was association between AFLP profile and origin of isolates (distinct genotypic clustering) between Salmonella strains of clinical and non-clinical origin with an odds ratio of 8.7 and 95% CI (4.815.9). Therefore, we concluded that a high resolution DNA fingerprinting approach such as AFLP may be helpful in differentiating strains of primary clinical importance.

Evaluation of phenotypic and genotypic approaches as predictors of Salmonella strains of clinical and non-clinical origin