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We developed a portable code for dissipative particle dynamics (DPD)simulations. This Fortran program named CAMUS has a couple of notable features.One is the omission of constructing the so-called neighboring particles list,providing a sizable speed-up per step and also a near linear scaling of costswith respect to the number of particles. The other is an easy inclusion ofadditional specific (such as 1-3 and 1-5 Morse bonding) interactions which arecrucial in describing protein structures. The formations of alpha-helix andbeta-sheet through DPD were then demonstrated. CAMUS is freely available at theGitHub site.

A portable code for dissipative particle dynamics (DPD) simulations with additional specific interactions