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Xanthomonas citri  pv.  malvacearum  is a major pathogen of cotton,  Gossypium hirsutum  L.. In this study we report the complete genome of the  X. citri  pv.  malvacearum  strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first  X. citri  pv.  malvacearum  genome with complete coding regions for  X. citri  pv.  malvacearum  transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.

The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1