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Shinella  sp. strain DD12, a novel phosphite assimilating bacterium, has been isolated from homogenized guts of 4 days starved zooplankton  Daphnia magna . Here we report the draft genome of this bacterium, which comprises 7,677,812 bp and 7505 predicted protein-coding genes.   Electronic supplementary material  The online version of this article (doi:10.1186/s40793-015-0129-3) contains supplementary material, which is available to authorized users.

Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna