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Members of the gammaproteobacterial genus  Halomonas  are common in marine environments.  Halomonas  and other members of the  Oceanospirillales  have recently been identified as prominent members of the surface microbiota of reef-building corals.  Halomonas meridiana  strain R1t3 was isolated from the surface mucus layer of the scleractinian coral  Acropora palmata  in 2005 from the Florida Keys. This strain was chosen for genome sequencing to provide insight into the role of commensal heterotrophic bacteria in the coral holobiont. The draft genome consists of 290 scaffolds, totaling 3.5 Mbp in length and contains 3397 protein-coding genes.   Electronic supplementary material  The online version of this article (doi:10.1186/s40793-015-0069-y) contains supplementary material, which is available to authorized users.

Draft genome sequence of Halomonas meridiana R1t3 isolated from the surface microbiota of the Caribbean Elkhorn coral Acropora palmata