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Background  Several ungulate species are feeding and propagation hosts for the tick  Ixodes ricinus  as well as hosts to a wide range of zoonotic pathogens. Here, we focus on  Anaplasma phagocytophilum  and  Borrelia burgdorferi  ( s.l. ), two important pathogens for which ungulates are amplifying and dilution hosts, respectively. Ungulate management is one of the main tools to mitigate human health risks associated with these tick-borne pathogens. Across Europe, different species of ungulates are expanding their ranges and increasing in numbers. It is currently unclear if and how the relative contribution to the life-cycle of  I. ricinus  and the transmission cycles of tick-borne pathogens differ among these species. In this study, we aimed to identify these relative contributions for five European ungulate species.    Methods  We quantified the tick load and collected ticks and spleen samples from hunted fallow deer ( Dama dama ,  n  = 131), moose ( Alces alces ,  n  = 15), red deer ( Cervus elaphus ,  n  = 61), roe deer ( Capreolus capreolus ,  n  = 30) and wild boar ( Sus scrofa ,  n  = 87) in south-central Sweden. We investigated the presence of tick-borne pathogens in ticks and spleen samples using real-time PCR. We determined if ungulate species differed in tick load (prevalence and intensity) and in infection prevalence in their tissue as well as in the ticks feeding on them.    Results  Wild boar hosted fewer adult female ticks than any of the deer species, indicating that deer are more important as propagation hosts. Among the deer species, moose had the lowest number of female ticks, while there was no difference among the other deer species. Given the low number of infected nymphs, the relative contribution of all ungulate species to the transmission of  B. burgdorferi  ( s.l. ) was low. Fallow deer, red deer and roe deer contributed more to the transmission of  A. phagocytophilum  than wild boar.    Conclusions  The ungulate species clearly differed in their role as a propagation host and in the transmission of  B. burgdorferi  and  A. phagocytophilum . This study provides crucial information for ungulate management as a tool to mitigate zoonotic disease risk and argues for adapting management approaches to the local ungulate species composition and the pathogen(s) of concern.    Graphic abstractSupplementary Information  The online version contains supplementary material available at 10.1186/s13071-021-04860-w.

Wild ungulate species differ in their contribution to the transmission of Ixodes ricinus-borne pathogens