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Background  Abscisic acid (ABA) is an important phytohormone for plant growth, development and responding to stresses such as drought, salinity, and pathogen infection. Pyrabactin Resistance 1 (PYR1)/PYR1-Like (PYL)/Regulatory Component of ABA Receptor (RCAR) (hereafter referred to as PYLs) has been identified as the ABA receptors. The PYL family members have been well studied in many plants. However, the members of PYL family have not been systematically identified at genome level in cultivated tobacco ( Nicotiana tabacum ) and its two ancestors. In this study, the phylogenic relationships, chromosomal distribution, gene structures, conserved motifs/regions, and expression profiles of  NtPYL s were analyzed.    Results  We identified 29, 11, 16  PYL s in the genomes of allotetraploid  N. tabacum , and its two diploid ancestors  N. tomentosiformis  and  N. sylvestris , respectively. The phylogenetic analysis revealed that NtPYLs can be divided into three subfamilies, and each  NtPYL  has one counterpart in  N. sylvestris  or  N. tomentosiformis . Based on microarray analysis of  NtPYL  transcripts, four  NtPYL s (from subfamily II, III), and five  NtPYL s (from subfamily I) are highlighted as potential candidates for further functional characterization in  N. tabacum  seed development, response to ABA, and germination, and resistance to abiotic stresses, respectively. Interestingly, the expression profiles of members in the same  NtPYL  subfamily showed somehow similar patterns in tissues at different developmental stages and in leaves of seedlings under drought stress, suggesting particular NtPYLs might have multiple functions in both plant development and drought stress response.    Conclusions   NtPYL s are highlighted for important functions in seed development, germination and response to ABA, and particular in drought tolerance. This work will not only shed light on the PYL family in tobacco, but also provides some valuable information for functional characterization of ABA receptors in  N. tabacum .    Electronic supplementary material  The online version of this article (10.1186/s12864-019-5839-2) contains supplementary material, which is available to authorized users.

bmc genomics

Genome-wide identification and characterization of ABA receptor PYL/RCAR gene family reveals evolution and roles in drought stress in Nicotiana tabacum