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Salmonella enterica  Serotype 4,[5],12:i:-, a monophasic variant of  S . Typhimurium, with high virulence and multidrug resistance is distributed globally causing pathogenicity to both humans and domesticated animals. BOX-A1R-based repetitive extragenic palindromic-PCR (BOX)-PCR proved to be superior to three other repetitive element-based PCR typing methods, namely, enterobacterial repetitive intergenic consensus (ERIC)-, poly-trinucleotide (GTG) 5 -, and repetitive extragenic palindromic (REP)-PCR (carried out under a single optimized amplification condition), in differentiating genetic relatedness among  S . 4,[5],12:i:- isolates from feces of hospitalized patients ( n =12) and isolates from minced pork samples of  S . 4,[5],12:i:- ( n =6),  S . Typhimurium ( n =6), and  Salmonella  Serogroup B ( n =4) collected from different regions of northern Thailand. Construction of phylogenetic trees from amplicon size patterns allowed allocation of  Salmonella  isolates into clusters of similar genetic relatedness, with BOX-PCR generating more unique clusters for each serotype than the other three typing methods. BOX-, (GTG) 5 -, and REP-PCR indicated significant genetic relatedness between  S . 4,[5],12:i:- isolates 1 and 9 from hospitalized patients and  S . 4,[5],12:i:- isolate en 29 from minced pork, suggesting a possible route of transmission. Thus, BOX-PCR provides a suitable molecular typing method for discriminating genetic relatedness among  Salmonella  spp. of the same and different serotypes and should be suitable for application in typing and tracking route of transmission in  Salmonella  outbreaks.

international journal of microbiology

Effectiveness of BOX-PCR in Differentiating Genetic Relatedness among<i>Salmonella enterica</i>Serotype 4,[5],12:i:- Isolates from Hospitalized Patients and Minced Pork Samples in Northern Thailand

Effectiveness of BOX-PCR in Differentiating Genetic Relatedness amongSalmonella entericaSerotype 4,[5],12:i:- Isolates from Hospitalized Patients and Minced Pork Samples in Northern Thailand