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Practical Value of Food Pathogen Traceability through Building a Whole-Genome Sequencing Network and Database
Author(s) -
Marc W. Allard,
Errol Strain,
David Melka,
Kelly Bunning,
Steven M. Musser,
Eric W. Brown,
Ruth Timme
Publication year - 2016
Publication title -
journal of clinical microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.349
H-Index - 255
eISSN - 1070-633X
pISSN - 0095-1137
DOI - 10.1128/jcm.00081-16
Subject(s) - traceability , outbreak , food chain , genome , food microbiology , foodborne pathogen , food safety , microbiology and biotechnology , business , biology , computer science , listeria monocytogenes , genetics , virology , food science , gene , ecology , bacteria , software engineering
The FDA has created a United States-based open-source whole-genome sequencing network of state, federal, international, and commercial partners. The GenomeTrakr network represents a first-of-its-kind distributed genomic food shield for characterizing and tracing foodborne outbreak pathogens back to their sources. The GenomeTrakr network is leading investigations of outbreaks of foodborne illnesses and compliance actions with more accurate and rapid recalls of contaminated foods as well as more effective monitoring of preventive controls for food manufacturing environments. An expanded network would serve to provide an international rapid surveillance system for pathogen traceback, which is critical to support an effective public health response to bacterial outbreaks.

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