Complete Genome Sequence of a Duck Hepatitis A Virus 1 Isolated from a Pigeon in China | Zendy

Shaohua Shi | Zendy; Hongmei Chen | Zendy; Zhen Chen | Zendy; Guanghua Fu | Zendy; Chunhe Wan | Zendy; Yu Huang | Zendy; Su Lin | Zendy; Longfei Cheng | Zendy; Qiuling Fu | Zendy; Jiansheng Lin | Zendy; Fang Lin | Zendy

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Complete Genome Sequence of a Duck Hepatitis A Virus 1 Isolated from a Pigeon in China

Author(s) -

Shaohua Shi,

Hongmei Chen,

Zhen Chen,

Guanghua Fu,

Chunhe Wan,

Yu Huang,

Su Lin,

Longfei Cheng,

Qiuling Fu,

Jiansheng Lin,

Fang Lin

Publication year - 2013

Publication title -

genome announcements

Language(s) - English

Resource type - Journals

ISSN - 2169-8287

DOI - 10.1128/genomea.00451-13

Subject(s) - biology , hypervariable region , homology (biology) , virology , whole genome sequencing , genome , virus , sequence homology , strain (injury) , hepatitis a virus , genetics , peptide sequence , gene , anatomy

We report here the complete genome sequence of a duck hepatitis A virus 1 (DHAV-1), strain FJ1220, isolated from a dead pigeon in eastern China. DHAV-1 FJ1220 has high homology of up to 99.6% to the DHAV-1 strain Du/CH/LGD/111238 but relatively low homology to strains FFZ05 and FZ05. An amino acid hypervariable region in the VP1 protein of FJ1220 has the motif (180)TPSGR(184) replaced by (180)ALSRG(184) compared to strains FFZ05 and FZ05.

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