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The skeleton formalism, which aims at extracting and quantifying the filamentary structure of our Universe, is generalized to 3D density fields. A numerical method for computing a local approximation of the skeleton is presented and validated here on Gaussian random fields. It involves solving equation , where  ∇ρ  and  are the gradient and Hessian matrix of the field. This method traces well the filamentary structure in 3D fields such as those produced by numerical simulations of the dark matter distribution on large scales, and is insensitive to monotonic biasing.  Two of its characteristics, namely its length and differential length, are analysed for Gaussian random fields. Its differential length per unit normalized density contrast scales like the probability distribution function of the underlying density contrast times the total length times a quadratic Edgeworth correction involving the square of the spectral parameter. The total length‐scales like the inverse square smoothing length, with a scaling factor given by  0.21 (5.28 + n )  where  n  is the power index of the underlying field. This dependency implies that the total length can be used to constrain the shape of the underlying power spectrum, hence the cosmology.  Possible applications of the skeleton to galaxy formation and cosmology are discussed. As an illustration, the orientation of the spin of dark haloes and the orientation of the flow near the skeleton is computed for cosmological dark matter simulations. The flow is laminar along the filaments, while spins of dark haloes within 500 kpc of the skeleton are preferentially orthogonal to the direction of the flow at a level of 25 per cent.

The 3D skeleton: tracing the filamentary structure of the Universe