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The recent uncovering of the \textit{Fermi} Bubbles/haze in the\textit{Fermi} gamma-ray data has generated theoretical work to explain such asignal of hard $\gamma$-rays in combination with the \textit{WMAP} haze signal.Many of these theoretical models can have distinctively different implicationswith regards to the production of high energy neutrinos. We discuss theneutrino signals from different models proposed for the explanation of the\textit{Fermi} Bubbles/haze, more explicitly, from Dark Matter annihilation inthe galactic halo with conditions of preferential CR diffusion, from recent AGNjet activity, from periodic diffusive shock acceleration, from stochastic 2ndorder Fermi acceleration and from long time-scale star formation in thegalactic center in combination with strong galactic winds. We find that some ofthese models will be probed by the IceCube DeepCore detector. Moreover, with akm$^3$ telescope located at the north hemisphere, we will be able todiscriminate between the hadronic, leptonic and the DM models. Additionallyusing the reconstructed neutrino spectra we will probe annihilation of TeVscale dark matter towards the galactic center.

Searching for High Energy Neutrino counterpart signals; The case of the Fermi Bubbles signal and of Dark Matter annihilation in the inner Galaxy