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Reassessment of the phylogenetic relationships of Thiomonas cuprina
Author(s) -
Donovan P. Kelly,
Y. Uchino,
Harald Huber,
Ricardo Amils,
Ann P. Wood
Publication year - 2007
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijs.0.65537-0
Subject(s) - biology , 16s ribosomal rna , genbank , accession number (library science) , phylogenetic tree , gene sequence , strain (injury) , ribosomal rna , gene , botany , genetics , anatomy
The published sequence of the 16S rRNA gene of Thiomonas cuprina strain Hö5 (=DSM 5495T) (GenBank accession no. U67162) was found to be erroneous. The 16S rRNA genes from the type strain held by the DSMZ since 1990 (DSM 5495T=NBRC 102145T) and strain Hö5 maintained frozen in the Universität Regensburg for 23 years (=NBRC 102094) were sequenced and found to be identical, but to show no significant similarity to the U67162 sequence. This also casts some doubt on the previously published 5S and 23S rRNA gene sequences (GenBank accession nos U67171 and X75567). The correct 16S rRNA gene sequence showed 99.8% identity to those from Thiomonas delicata NBRC 14566T and 'Thiomonas arsenivorans' DSM 16361. The properties of these three species are re-evaluated, and emended descriptions are provided for the genus Thiomonas and the species Thiomonas cuprina.

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