Hierarchical analysis of dependency in metabolic networks
Author(s) -
Julien Gagneur,
David Jackson,
Georg Casari
Publication year - 2003
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btg115
Subject(s) - hierarchy , metabolic network , dependency (uml) , metabolic pathway , organism , computer science , computational biology , systems biology , representation (politics) , biology , gene , genetics , artificial intelligence , economics , political science , market economy , politics , law
Elucidation of metabolic networks for an increasing number of organisms reveals that even small networks can contain thousands of reactions and chemical species. The intimate connectivity between components complicates their decomposition into biologically meaningful sub-networks. Moreover, traditional higher-order representations of metabolic networks as metabolic pathways, suffers from the lack of rigorous definition, yielding pathways of disparate content and size.
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