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Anabarilius duoyiheensis  is a native and rare fish in Yunnan. In this study, the complete mitochondrial genome of  A. duoyiheensis  was sequenced and published for a total of 16,614 bp, including 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs, and one control region. The phylogenetic analysis based on the complete mitochondrial genome showed that  A. duoyiheensis  belongs to the clade of the genus  Anabarilius  and was sister to the clade of  Hemiculter . This study also contributes to the genus phylogeny of  Anabarilius  and other members of the family Xenocyprididae.

The complete mitochondrial genome and phylogenetic analysis of Anabarilius duoyiheensis Li, Mao & Lu, 2002 (Cypriniformes: Xenocyprididae)